> ## Documentation Index
> Fetch the complete documentation index at: https://docs.synthesize.bio/llms.txt
> Use this file to discover all available pages before exploring further.

# Function reference

> Generated reference pages for exported rsynthbio functions and constants.

`rsynthbio` ships its function-level docs with the package itself. The pages below are generated from the package help files in `man/` so the shared docs site can mirror the current exported reference.

<CardGroup cols={2}>
  <Card title="In R" icon="terminal">
    ```r theme={null}
    ?predict_query
    ?set_synthesize_token
    help(package = "rsynthbio")
    ```
  </Card>

  <Card title="CRAN reference manual (PDF)" icon="file-pdf" href="https://cran.r-project.org/web/packages/rsynthbio/rsynthbio.pdf">
    The full reference for the latest CRAN release, in one file.
  </Card>
</CardGroup>

## Predictions

* [`predict_query`](/rsynthbio/reference/predict_query) — Predict Gene Expression. Sends a query to the Synthesize Bio API for prediction
* [`get_example_query`](/rsynthbio/reference/get_example_query) — Get Example Query for Model. Retrieves an example query structure for a specific model.
* [`list_models`](/rsynthbio/reference/list_models) — List Available Models. Returns a list of all models available in the Synthesize Bio API.

## Authentication

* [`set_synthesize_token`](/rsynthbio/reference/set_synthesize_token) — Set Synthesize Bio API Token. Securely prompts for and stores the Synthesize Bio API token in the
* [`load_synthesize_token_from_keyring`](/rsynthbio/reference/load_synthesize_token_from_keyring) — Load Synthesize Bio API Token from Keyring. Loads the previously stored Synthesize Bio API token from the system
* [`has_synthesize_token`](/rsynthbio/reference/has_synthesize_token) — Check if Synthesize Bio API Token is Set. Checks whether a Synthesize Bio API token is currently set in the
* [`clear_synthesize_token`](/rsynthbio/reference/clear_synthesize_token) — Clear Synthesize Bio API Token. Clears the Synthesize Bio API token from the environment for the

## Constants

* [`API_BASE_URL`](/rsynthbio/reference/API_BASE_URL) — API Base URL. Base URL for the Synthesize Bio API
* [`DEFAULT_TIMEOUT`](/rsynthbio/reference/DEFAULT_TIMEOUT) — Default Timeout. Default timeout (seconds) for outbound HTTP requests
* [`DEFAULT_POLL_INTERVAL_SECONDS`](/rsynthbio/reference/DEFAULT_POLL_INTERVAL_SECONDS) — Default Poll Interval. Default polling interval (seconds) for async model queries
* [`DEFAULT_POLL_TIMEOUT_SECONDS`](/rsynthbio/reference/DEFAULT_POLL_TIMEOUT_SECONDS) — Default Poll Timeout. Default maximum timeout (seconds) for async model queries